Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ECEL1P3-201ENST00000427961 737 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 AC008550.1-201ENST00000511500 884 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 FAM87A-204ENST00000613235 858 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CICP14-201ENST00000629111 2732 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.51■□□□□ 0.07
LPCAT4Q643R3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LPCAT4Q643R3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 MIR718-201ENST00000390190 70 ntBASIC15.5■□□□□ 0.07
LPCAT4Q643R3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 SNORA78-201ENST00000459373 127 ntBASIC15.5■□□□□ 0.07
LPCAT4Q643R3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ZNF444P1-201ENST00000559497 298 ntBASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AC079781.5-202ENST00000641784 3743 ntBASIC15.5■□□□□ 0.07
LPCAT4Q643R3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LPCAT4Q643R3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 LINC01144-201ENST00000626198 1710 ntBASIC15.49■□□□□ 0.07
LPCAT4Q643R3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 NUS1P1-201ENST00000446295 882 ntBASIC15.49■□□□□ 0.07
LPCAT4Q643R3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LPCAT4Q643R3 AL355075.4-201ENST00000554988 638 ntBASIC15.49■□□□□ 0.07
LPCAT4Q643R3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms