Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDCP2Q5VXM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDCP2Q5VXM1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDCP2Q5VXM1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.45■□□□□ 0.06
CDCP2Q5VXM1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDCP2Q5VXM1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ANKRD19P-201ENST00000338192 862 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 CROCCP4-201ENST00000457096 498 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 BTNL10-201ENST00000595971 695 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 AC010319.3-201ENST00000597028 470 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 RPSAP52-203ENST00000622976 1023 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 CLK3P2-201ENST00000427566 1453 ntBASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDCP2Q5VXM1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 REXO1L6P-201ENST00000603433 1515 ntBASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 AC090340.1-201ENST00000620778 4980 ntBASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 USP32P1-208ENST00000506594 1164 ntBASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 AC104989.1-201ENST00000519711 778 ntBASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 CYP4F24P-201ENST00000586049 1580 ntBASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDCP2Q5VXM1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms