Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 ELK2BP-201ENST00000415014 1224 ntBASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 PAWRP1-201ENST00000451083 565 ntBASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 RPS15P9-201ENST00000494093 319 ntBASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATPAF1Q5TC12 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AC008667.4-201ENST00000607370 168 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 MIR7706-201ENST00000613747 67 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AC005593.1-201ENST00000624894 515 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TUBB8P12-201ENST00000308911 1335 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TUBB7P-202ENST00000428444 1305 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TUBB8P7-204ENST00000567960 1332 ntBASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms