Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX4Q33E94 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX4Q33E94 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RFX4Q33E94 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX4Q33E94 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.32■□□□□ 0.04
RFX4Q33E94 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX4Q33E94 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.32■□□□□ 0.04
RFX4Q33E94 TOP3BP1-201ENST00000420768 1380 ntBASIC15.32■□□□□ 0.04
RFX4Q33E94 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFX4Q33E94 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFX4Q33E94 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RFX4Q33E94 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.32■□□□□ 0.04
RFX4Q33E94 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
RFX4Q33E94 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX4Q33E94 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX4Q33E94 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX4Q33E94 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX4Q33E94 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX4Q33E94 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.31■□□□□ 0.04
RFX4Q33E94 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX4Q33E94 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.31■□□□□ 0.04
RFX4Q33E94 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 AC012615.1-201ENST00000565797 1299 ntBASIC15.31■□□□□ 0.04
RFX4Q33E94 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RFX4Q33E94 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 AC010331.1-201ENST00000611423 582 ntBASIC15.31■□□□□ 0.04
RFX4Q33E94 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX4Q33E94 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.31■□□□□ 0.04
RFX4Q33E94 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
RFX4Q33E94 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFX4Q33E94 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RFX4Q33E94 AC007326.2-201ENST00000624224 7579 ntBASIC15.31■□□□□ 0.04
RFX4Q33E94 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RFX4Q33E94 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX4Q33E94 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX4Q33E94 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX4Q33E94 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 PRYP5-201ENST00000451909 266 ntBASIC15.3■□□□□ 0.04
RFX4Q33E94 AC243591.1-201ENST00000452967 1364 ntBASIC15.3■□□□□ 0.04
RFX4Q33E94 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX4Q33E94 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX4Q33E94 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX4Q33E94 AL590787.1-201ENST00000568856 1315 ntBASIC15.3■□□□□ 0.04
RFX4Q33E94 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 AC099336.1-202ENST00000602961 463 ntBASIC15.3■□□□□ 0.04
RFX4Q33E94 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX4Q33E94 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RFX4Q33E94 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFX4Q33E94 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX4Q33E94 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
RFX4Q33E94 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms