Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-BQ31612 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-BQ31612 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-BQ31612 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-BQ31612 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-BQ31612 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-BQ31612 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HLA-BQ31612 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-BQ31612 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-BQ31612 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-BQ31612 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 FAM86MP-201ENST00000340703 885 ntBASIC15.77■□□□□ 0.12
HLA-BQ31612 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 KRT43P-201ENST00000434019 910 ntBASIC15.77■□□□□ 0.12
HLA-BQ31612 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-BQ31612 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-BQ31612 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-BQ31612 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-BQ31612 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-BQ31612 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-BQ31612 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 MIR4321-201ENST00000592276 80 ntBASIC15.77■□□□□ 0.12
HLA-BQ31612 AL365330.1-201ENST00000607459 531 ntBASIC15.77■□□□□ 0.12
HLA-BQ31612 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-BQ31612 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-BQ31612 PCGF3-213ENST00000620529 1899 ntBASIC15.77■□□□□ 0.11
HLA-BQ31612 PKD1P1-201ENST00000458669 6805 ntBASIC15.77■□□□□ 0.11
HLA-BQ31612 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-BQ31612 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HLA-BQ31612 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-BQ31612 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-BQ31612 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HLA-BQ31612 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-BQ31612 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-BQ31612 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 U82695.1-201ENST00000635752 1889 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 AC006538.1-201ENST00000567905 1585 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 ANKRD19P-201ENST00000338192 862 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-BQ31612 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-BQ31612 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.76■□□□□ 0.11
HLA-BQ31612 BNIP3P42-201ENST00000454982 569 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 RN7SL399P-201ENST00000471648 279 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-BQ31612 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.76■□□□□ 0.11
HLA-BQ31612 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.76■□□□□ 0.11
HLA-BQ31612 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HLA-BQ31612 BNIP3P29-201ENST00000598302 571 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 AC011447.5-201ENST00000616168 564 ntBASIC15.76■□□□□ 0.11
HLA-BQ31612 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HLA-BQ31612 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-BQ31612 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HLA-BQ31612 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-BQ31612 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
HLA-BQ31612 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-BQ31612 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HLA-BQ31612 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HLA-BQ31612 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.75■□□□□ 0.11
HLA-BQ31612 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-BQ31612 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms