Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RSPO4Q2I0M5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC092978.1-202ENST00000637590 1327 ntBASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 RN7SL769P-201ENST00000469386 295 ntBASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 KRT8P19-201ENST00000551916 1455 ntBASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RSPO4Q2I0M5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 AC134043.2-201ENST00000624206 2238 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 BCL2-203ENST00000589955 5011 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 AC036164.1-201ENST00000570544 333 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 AL008638.5-201ENST00000623814 1298 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 RHOXF1P1-202ENST00000635473 501 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RSPO4Q2I0M5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.74■□□□□ 0.11
RSPO4Q2I0M5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms