Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
PRAMEP78395 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEP78395 PMS2P4-201ENST00000412466 1052 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 AL590627.1-203ENST00000421194 1026 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 RHOQP3-201ENST00000437982 621 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 FDX1P1-201ENST00000449115 551 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 POU5F1P6-201ENST00000466990 990 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.59■□□□□ 0.25
PRAMEP78395 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 AC034105.1-201ENST00000563488 319 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 MIR3909-201ENST00000579518 119 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 AC064836.3-201ENST00000607928 673 ntBASIC16.59■□□□□ 0.25
PRAMEP78395 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEP78395 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEP78395 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEP78395 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEP78395 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEP78395 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.58■□□□□ 0.25
PRAMEP78395 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEP78395 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.58■□□□□ 0.25
PRAMEP78395 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEP78395 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEP78395 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
PRAMEP78395 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEP78395 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEP78395 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEP78395 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEP78395 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PRAMEP78395 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEP78395 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEP78395 MTHFR-217ENST00000641820 1569 ntBASIC16.58■□□□□ 0.24
PRAMEP78395 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEP78395 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEP78395 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEP78395 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEP78395 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms