Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 BCRP1-201ENST00000444246 691 ntBASIC17.25■□□□□ 0.35
USP46P62068 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.25■□□□□ 0.35
USP46P62068 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 AC140878.1-201ENST00000565277 250 ntBASIC17.25■□□□□ 0.35
USP46P62068 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.25■□□□□ 0.35
USP46P62068 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.25■□□□□ 0.35
USP46P62068 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP46P62068 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
USP46P62068 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP46P62068 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP46P62068 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 AC098799.1-201ENST00000504752 800 ntBASIC17.24■□□□□ 0.35
USP46P62068 AC093214.1-201ENST00000511688 1107 ntBASIC17.24■□□□□ 0.35
USP46P62068 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.24■□□□□ 0.35
USP46P62068 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.24■□□□□ 0.35
USP46P62068 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
USP46P62068 AC003101.2-201ENST00000612557 442 ntBASIC17.24■□□□□ 0.35
USP46P62068 AC020765.3-201ENST00000613051 740 ntBASIC17.24■□□□□ 0.35
USP46P62068 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
USP46P62068 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP46P62068 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
USP46P62068 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP46P62068 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.23■□□□□ 0.35
USP46P62068 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
USP46P62068 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
USP46P62068 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 FAM220BP-201ENST00000377689 816 ntBASIC17.23■□□□□ 0.35
USP46P62068 HLA-H-201ENST00000383620 1096 ntBASIC17.23■□□□□ 0.35
USP46P62068 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.23■□□□□ 0.35
USP46P62068 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.23■□□□□ 0.35
USP46P62068 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms