Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.32□□□□□ -0.12
CLDN12P56749 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLDN12P56749 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 TOB2P1-201ENST00000469761 992 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLDN12P56749 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 AC114341.1-201ENST00000618070 349 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 AC073592.4-201ENST00000623827 446 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 LINC01144-201ENST00000626198 1710 ntBASIC14.32□□□□□ -0.12
CLDN12P56749 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDN12P56749 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 TPSP2-201ENST00000561760 610 ntBASIC14.31□□□□□ -0.12
CLDN12P56749 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN12P56749 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN12P56749 LINC01238-205ENST00000567549 1107 ntBASIC14.31□□□□□ -0.12
CLDN12P56749 AC064862.7-201ENST00000604520 867 ntBASIC14.31□□□□□ -0.12
CLDN12P56749 AC010331.1-201ENST00000611423 582 ntBASIC14.31□□□□□ -0.12
CLDN12P56749 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN12P56749 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN12P56749 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN12P56749 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CLDN12P56749 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN12P56749 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN12P56749 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN12P56749 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms