Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH4P55283 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH4P55283 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 AL035456.1-201ENST00000456064 1369 ntBASIC16.7■□□□□ 0.26
CDH4P55283 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH4P55283 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH4P55283 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH4P55283 AC107890.1-201ENST00000422478 521 ntBASIC16.7■□□□□ 0.26
CDH4P55283 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.7■□□□□ 0.26
CDH4P55283 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH4P55283 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH4P55283 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH4P55283 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH4P55283 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH4P55283 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH4P55283 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH4P55283 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.69■□□□□ 0.26
CDH4P55283 AC140878.1-201ENST00000565277 250 ntBASIC16.69■□□□□ 0.26
CDH4P55283 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 AC093512.1-201ENST00000617969 520 ntBASIC16.69■□□□□ 0.26
CDH4P55283 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH4P55283 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.69■□□□□ 0.26
CDH4P55283 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH4P55283 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH4P55283 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms