Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATP1B3P54709 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.3□□□□□ -0.12
ATP1B3P54709 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ATP1B3P54709 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATP1B3P54709 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.3□□□□□ -0.12
ATP1B3P54709 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.3□□□□□ -0.12
ATP1B3P54709 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.3□□□□□ -0.12
ATP1B3P54709 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATP1B3P54709 AL512652.2-201ENST00000625156 1716 ntBASIC14.29□□□□□ -0.12
ATP1B3P54709 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATP1B3P54709 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.29□□□□□ -0.12
ATP1B3P54709 HCG4-201ENST00000418983 998 ntBASIC14.29□□□□□ -0.12
ATP1B3P54709 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.29□□□□□ -0.12
ATP1B3P54709 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 PMS2P1-201ENST00000431037 1228 ntBASIC14.29□□□□□ -0.12
ATP1B3P54709 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.29□□□□□ -0.12
ATP1B3P54709 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.29□□□□□ -0.12
ATP1B3P54709 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.29□□□□□ -0.12
ATP1B3P54709 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATP1B3P54709 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
ATP1B3P54709 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 AL031731.1-201ENST00000642131 2094 ntBASIC14.29□□□□□ -0.12
ATP1B3P54709 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.29□□□□□ -0.12
ATP1B3P54709 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATP1B3P54709 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.28□□□□□ -0.12
ATP1B3P54709 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ATP1B3P54709 RPS2P1-201ENST00000434010 821 ntBASIC14.28□□□□□ -0.12
ATP1B3P54709 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.28□□□□□ -0.12
ATP1B3P54709 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.28□□□□□ -0.12
ATP1B3P54709 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.28□□□□□ -0.12
ATP1B3P54709 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.28□□□□□ -0.12
ATP1B3P54709 PGM5P2-202ENST00000637225 1043 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms