Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GPC3P51654 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
GPC3P51654 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.05■□□□□ 0.48
GPC3P51654 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.05■□□□□ 0.48
GPC3P51654 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.04■□□□□ 0.48
GPC3P51654 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GPC3P51654 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
GPC3P51654 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 AL035633.1-201ENST00000406139 838 ntBASIC18.04■□□□□ 0.48
GPC3P51654 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC3P51654 AC241585.1-201ENST00000433527 519 ntBASIC18.04■□□□□ 0.48
GPC3P51654 TSPY16P-201ENST00000449843 468 ntBASIC18.04■□□□□ 0.48
GPC3P51654 AC004890.2-204ENST00000481968 304 ntBASIC18.04■□□□□ 0.48
GPC3P51654 BANF1P1-201ENST00000553684 263 ntBASIC18.04■□□□□ 0.48
GPC3P51654 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC3P51654 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.04■□□□□ 0.48
GPC3P51654 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC3P51654 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC3P51654 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.04■□□□□ 0.48
GPC3P51654 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC3P51654 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 AL138828.2-201ENST00000615812 383 ntBASIC18.04■□□□□ 0.48
GPC3P51654 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC3P51654 AL590560.3-201ENST00000623350 461 ntBASIC18.04■□□□□ 0.48
GPC3P51654 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 AC100757.3-201ENST00000622361 1406 ntBASIC18.04■□□□□ 0.48
GPC3P51654 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC3P51654 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC3P51654 AL035456.1-201ENST00000456064 1369 ntBASIC18.04■□□□□ 0.48
GPC3P51654 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
GPC3P51654 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 TSSK5P-201ENST00000423978 907 ntBASIC18.03■□□□□ 0.48
GPC3P51654 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 AL512638.1-201ENST00000457493 794 ntBASIC18.03■□□□□ 0.48
GPC3P51654 HLA-V-204ENST00000476601 1289 ntBASIC18.03■□□□□ 0.48
GPC3P51654 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.03■□□□□ 0.48
GPC3P51654 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.03■□□□□ 0.48
GPC3P51654 AC138761.1-201ENST00000584393 385 ntBASIC18.03■□□□□ 0.48
GPC3P51654 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.03■□□□□ 0.48
GPC3P51654 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC3P51654 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC3P51654 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 AL589702.1-201ENST00000641229 1509 ntBASIC18.03■□□□□ 0.48
GPC3P51654 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC3P51654 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC3P51654 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.02■□□□□ 0.48
GPC3P51654 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GPC3P51654 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC3P51654 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC3P51654 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms