Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PCDH8P1-201ENST00000428983 2773 ntBASIC14.62□□□□□ -0.07
CSNK1A1P48729 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1A1P48729 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 AC068587.6-202ENST00000641839 5619 ntBASIC14.61□□□□□ -0.07
CSNK1A1P48729 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 PMS2P7-201ENST00000506558 1336 ntBASIC14.61□□□□□ -0.07
CSNK1A1P48729 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1A1P48729 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1A1P48729 AC005622.1-201ENST00000636801 1703 ntBASIC14.61□□□□□ -0.07
CSNK1A1P48729 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 MTHFR-217ENST00000641820 1569 ntBASIC14.6□□□□□ -0.07
CSNK1A1P48729 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AC063926.3-201ENST00000624734 5658 ntBASIC14.6□□□□□ -0.07
CSNK1A1P48729 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms