Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A6P48664 AP003680.1-201ENST00000598970 3660 ntBASIC16.17■□□□□ 0.18
SLC1A6P48664 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A6P48664 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A6P48664 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC1A6P48664 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A6P48664 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A6P48664 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A6P48664 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC1A6P48664 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A6P48664 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A6P48664 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 AC107918.2-201ENST00000530817 355 ntBASIC16.16■□□□□ 0.18
SLC1A6P48664 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A6P48664 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A6P48664 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
SLC1A6P48664 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A6P48664 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A6P48664 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC1A6P48664 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC1A6P48664 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 AC138894.3-201ENST00000603787 634 ntBASIC16.15■□□□□ 0.18
SLC1A6P48664 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.15■□□□□ 0.18
SLC1A6P48664 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 NPAP1P7-201ENST00000613027 823 ntBASIC16.15■□□□□ 0.18
SLC1A6P48664 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC1A6P48664 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC1A6P48664 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.15■□□□□ 0.18
SLC1A6P48664 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC1A6P48664 SSR4P1-203ENST00000599569 2260 ntBASIC16.15■□□□□ 0.18
SLC1A6P48664 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC1A6P48664 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC1A6P48664 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms