Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A12P48065 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A12P48065 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A12P48065 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.78■□□□□ 0.12
SLC6A12P48065 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SLC6A12P48065 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC6A12P48065 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A12P48065 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.78■□□□□ 0.12
SLC6A12P48065 MKNK2P1-201ENST00000437526 628 ntBASIC15.78■□□□□ 0.12
SLC6A12P48065 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 AC243562.1-201ENST00000560672 389 ntBASIC15.78■□□□□ 0.12
SLC6A12P48065 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC6A12P48065 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC6A12P48065 AC027307.2-201ENST00000591252 911 ntBASIC15.78■□□□□ 0.12
SLC6A12P48065 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC6A12P48065 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A12P48065 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A12P48065 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A12P48065 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A12P48065 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC6A12P48065 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
SLC6A12P48065 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SLC6A12P48065 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A12P48065 HAUS4P1-201ENST00000406739 1145 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 AC142381.1-201ENST00000426099 345 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A12P48065 ACTG1P14-201ENST00000446382 1122 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.77■□□□□ 0.12
SLC6A12P48065 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.77■□□□□ 0.12
SLC6A12P48065 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 ALG1L5P-201ENST00000482043 771 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A12P48065 AC098859.1-201ENST00000502915 1238 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A12P48065 MTDHP5-201ENST00000598980 586 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 AC026120.1-201ENST00000611536 926 ntBASIC15.77■□□□□ 0.12
SLC6A12P48065 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A12P48065 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A12P48065 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A12P48065 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A12P48065 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A12P48065 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A12P48065 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A12P48065 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A12P48065 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SLC6A12P48065 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC6A12P48065 AC008741.2-201ENST00000612792 3115 ntBASIC15.77■□□□□ 0.11
SLC6A12P48065 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A12P48065 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms