Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.83□□□□□ -0.04
APOBEC1P41238 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOBEC1P41238 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOBEC1P41238 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.83□□□□□ -0.04
APOBEC1P41238 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBEC1P41238 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBEC1P41238 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBEC1P41238 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBEC1P41238 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOBEC1P41238 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AC008894.3-201ENST00000624324 3103 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 KRT8P23-201ENST00000560090 1207 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 AC243562.1-201ENST00000560672 389 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AC027307.2-201ENST00000591252 911 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.82□□□□□ -0.04
APOBEC1P41238 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
APOBEC1P41238 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
APOBEC1P41238 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 AL596087.1-201ENST00000400979 1969 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.82□□□□□ -0.04
APOBEC1P41238 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOBEC1P41238 AL589702.1-201ENST00000641229 1509 ntBASIC14.82□□□□□ -0.04
APOBEC1P41238 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.81□□□□□ -0.04
APOBEC1P41238 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APOBEC1P41238 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 UPF3AP3-201ENST00000420996 769 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 GPX1P2-201ENST00000429271 606 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.81□□□□□ -0.04
APOBEC1P41238 AC112482.1-201ENST00000492080 688 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 AC098859.1-201ENST00000502915 1238 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.81□□□□□ -0.04
APOBEC1P41238 AC079140.1-201ENST00000508039 487 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 IGHV3-62-201ENST00000520057 340 ntBASIC14.81□□□□□ -0.04
APOBEC1P41238 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.81□□□□□ -0.04
APOBEC1P41238 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.81□□□□□ -0.04
APOBEC1P41238 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.81□□□□□ -0.04
APOBEC1P41238 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.81□□□□□ -0.04
APOBEC1P41238 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
APOBEC1P41238 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
APOBEC1P41238 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.81□□□□□ -0.04
APOBEC1P41238 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.81□□□□□ -0.04
APOBEC1P41238 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.81□□□□□ -0.04
APOBEC1P41238 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOBEC1P41238 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms