Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CKS2P33552 AP003680.1-201ENST00000598970 3660 ntBASIC12.13□□□□□ -0.47
CKS2P33552 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 AL671710.1-201ENST00000610245 2349 ntBASIC12.12□□□□□ -0.47
CKS2P33552 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS2P33552 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.12□□□□□ -0.47
CKS2P33552 REXO1L8P-201ENST00000604378 1897 ntBASIC12.12□□□□□ -0.47
CKS2P33552 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 AC125634.1-201ENST00000438758 1403 ntBASIC12.12□□□□□ -0.47
CKS2P33552 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
CKS2P33552 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS2P33552 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS2P33552 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 CD99P1-205ENST00000527459 561 ntBASIC12.12□□□□□ -0.47
CKS2P33552 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 DUX4L17-201ENST00000557360 1267 ntBASIC12.12□□□□□ -0.47
CKS2P33552 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.12□□□□□ -0.47
CKS2P33552 MIR4651-201ENST00000582622 73 ntBASIC12.12□□□□□ -0.47
CKS2P33552 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS2P33552 AC141257.4-201ENST00000634557 245 ntBASIC12.12□□□□□ -0.47
CKS2P33552 AC136944.6-201ENST00000634818 245 ntBASIC12.12□□□□□ -0.47
CKS2P33552 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CKS2P33552 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.12□□□□□ -0.47
CKS2P33552 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CKS2P33552 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS2P33552 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.11□□□□□ -0.47
CKS2P33552 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 AL158047.1-201ENST00000445918 881 ntBASIC12.11□□□□□ -0.47
CKS2P33552 POU5F1P6-201ENST00000466990 990 ntBASIC12.11□□□□□ -0.47
CKS2P33552 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.11□□□□□ -0.47
CKS2P33552 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS2P33552 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.11□□□□□ -0.47
CKS2P33552 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.11□□□□□ -0.47
CKS2P33552 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CKS2P33552 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS2P33552 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms