Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.52■□□□□ 0.23
LSP1P33241 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.52■□□□□ 0.23
LSP1P33241 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
LSP1P33241 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LSP1P33241 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.51■□□□□ 0.23
LSP1P33241 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LSP1P33241 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.51■□□□□ 0.23
LSP1P33241 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.51■□□□□ 0.23
LSP1P33241 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.51■□□□□ 0.23
LSP1P33241 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 AC005332.3-201ENST00000589904 676 ntBASIC16.51■□□□□ 0.23
LSP1P33241 AL138831.2-201ENST00000606564 490 ntBASIC16.51■□□□□ 0.23
LSP1P33241 FAM87A-204ENST00000613235 858 ntBASIC16.51■□□□□ 0.23
LSP1P33241 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LSP1P33241 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.51■□□□□ 0.23
LSP1P33241 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LSP1P33241 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.51■□□□□ 0.23
LSP1P33241 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LSP1P33241 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSP1P33241 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LSP1P33241 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
LSP1P33241 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.5■□□□□ 0.23
LSP1P33241 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LSP1P33241 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 ZNF444P1-201ENST00000559497 298 ntBASIC16.5■□□□□ 0.23
LSP1P33241 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 CICP14-201ENST00000629111 2732 ntBASIC16.5■□□□□ 0.23
LSP1P33241 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LSP1P33241 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
LSP1P33241 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSP1P33241 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms