Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC123567.1-201ENST00000548294 1261 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HOXA9P31269 GGT3P-204ENST00000453783 1664 ntBASIC16.94■□□□□ 0.3
HOXA9P31269 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA9P31269 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA9P31269 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXA9P31269 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXA9P31269 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA9P31269 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 HLA-V-201ENST00000429037 534 ntBASIC16.93■□□□□ 0.3
HOXA9P31269 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA9P31269 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 AL589987.1-201ENST00000453380 819 ntBASIC16.93■□□□□ 0.3
HOXA9P31269 ACA64.2-201ENST00000459014 129 ntBASIC16.93■□□□□ 0.3
HOXA9P31269 RN7SL837P-201ENST00000463010 287 ntBASIC16.93■□□□□ 0.3
HOXA9P31269 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA9P31269 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA9P31269 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HOXA9P31269 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXA9P31269 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA9P31269 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA9P31269 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA9P31269 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA9P31269 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.92■□□□□ 0.3
HOXA9P31269 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 TIMM17BP1-201ENST00000545713 516 ntBASIC16.92■□□□□ 0.3
HOXA9P31269 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.92■□□□□ 0.3
HOXA9P31269 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA9P31269 TMEM261P1-201ENST00000604899 340 ntBASIC16.92■□□□□ 0.3
HOXA9P31269 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA9P31269 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms