Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHC1P29353 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SHC1P29353 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.08■□□□□ 0
SHC1P29353 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHC1P29353 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.07■□□□□ 0
SHC1P29353 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.07■□□□□ 0
SHC1P29353 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.07■□□□□ 0
SHC1P29353 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
SHC1P29353 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 RNU1-129P-201ENST00000384064 167 ntBASIC15.07■□□□□ 0
SHC1P29353 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 ALG1L5P-201ENST00000482043 771 ntBASIC15.07■□□□□ 0
SHC1P29353 AP002490.2-201ENST00000524791 560 ntBASIC15.07■□□□□ 0
SHC1P29353 U1.21-201ENST00000580816 167 ntBASIC15.07■□□□□ 0
SHC1P29353 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.07■□□□□ 0
SHC1P29353 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.07■□□□□ 0
SHC1P29353 AC068137.2-201ENST00000605408 478 ntBASIC15.07■□□□□ 0
SHC1P29353 AL078644.1-201ENST00000609881 752 ntBASIC15.07■□□□□ 0
SHC1P29353 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SHC1P29353 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHC1P29353 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHC1P29353 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.07■□□□□ 0
SHC1P29353 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SHC1P29353 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.07■□□□□ 0
SHC1P29353 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHC1P29353 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SHC1P29353 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.07■□□□□ 0
SHC1P29353 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.06■□□□□ 0
SHC1P29353 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.06■□□□□ 0
SHC1P29353 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 BX842568.4-201ENST00000421222 227 ntBASIC15.06■□□□□ 0
SHC1P29353 MCCD1P2-201ENST00000423228 335 ntBASIC15.06■□□□□ 0
SHC1P29353 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.06■□□□□ 0
SHC1P29353 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.06■□□□□ 0
SHC1P29353 AP002472.1-201ENST00000577490 586 ntBASIC15.06■□□□□ 0
SHC1P29353 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.06■□□□□ 0
SHC1P29353 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.06■□□□□ 0
SHC1P29353 AL031055.1-201ENST00000606362 631 ntBASIC15.06■□□□□ 0
SHC1P29353 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
SHC1P29353 AP001350.2-201ENST00000625104 1094 ntBASIC15.06■□□□□ 0
SHC1P29353 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.06■□□□□ 0
SHC1P29353 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SHC1P29353 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHC1P29353 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.06■□□□□ 0
SHC1P29353 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.05■□□□□ 0
SHC1P29353 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SHC1P29353 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SHC1P29353 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms