Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL009183.1-201ENST00000603760 355 ntBASIC16.14■□□□□ 0.17
CDH3P22223 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 LINC02228-204ENST00000642115 2962 ntBASIC16.14■□□□□ 0.17
CDH3P22223 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH3P22223 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH3P22223 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 AL662844.4-201ENST00000606367 2838 ntBASIC16.13■□□□□ 0.17
CDH3P22223 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH3P22223 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 RNU1-129P-201ENST00000384064 167 ntBASIC16.13■□□□□ 0.17
CDH3P22223 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 AL355306.1-201ENST00000415580 579 ntBASIC16.13■□□□□ 0.17
CDH3P22223 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH3P22223 AP000344.2-201ENST00000512987 629 ntBASIC16.13■□□□□ 0.17
CDH3P22223 FAM86C2P-203ENST00000528684 1004 ntBASIC16.13■□□□□ 0.17
CDH3P22223 U1.21-201ENST00000580816 167 ntBASIC16.13■□□□□ 0.17
CDH3P22223 AC099522.2-201ENST00000607001 744 ntBASIC16.13■□□□□ 0.17
CDH3P22223 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH3P22223 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH3P22223 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH3P22223 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH3P22223 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 SPDYE11-202ENST00000450699 704 ntBASIC16.12■□□□□ 0.17
CDH3P22223 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH3P22223 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.12■□□□□ 0.17
CDH3P22223 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH3P22223 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH3P22223 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 SPDYE9P-201ENST00000570642 692 ntBASIC16.12■□□□□ 0.17
CDH3P22223 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH3P22223 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH3P22223 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH3P22223 AC026120.1-201ENST00000611536 926 ntBASIC16.12■□□□□ 0.17
CDH3P22223 SPDYE10P-202ENST00000612005 668 ntBASIC16.12■□□□□ 0.17
CDH3P22223 SPDYE8P-202ENST00000612377 668 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms