Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.97■□□□□ 0.47
CLTAP09496 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.97■□□□□ 0.47
CLTAP09496 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.97■□□□□ 0.47
CLTAP09496 AC009093.7-201ENST00000623853 1223 ntBASIC17.97■□□□□ 0.47
CLTAP09496 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.97■□□□□ 0.47
CLTAP09496 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLTAP09496 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.97■□□□□ 0.47
CLTAP09496 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.97■□□□□ 0.47
CLTAP09496 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLTAP09496 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.97■□□□□ 0.47
CLTAP09496 HYMAI-201ENST00000635591 3347 ntBASIC17.97■□□□□ 0.47
CLTAP09496 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 PCDHA14-201ENST00000506751 2298 ntBASIC17.96■□□□□ 0.47
CLTAP09496 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.96■□□□□ 0.47
CLTAP09496 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.96■□□□□ 0.47
CLTAP09496 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.96■□□□□ 0.47
CLTAP09496 TSEN15P1-201ENST00000423257 515 ntBASIC17.96■□□□□ 0.47
CLTAP09496 KRT18P32-201ENST00000424695 1287 ntBASIC17.96■□□□□ 0.47
CLTAP09496 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.96■□□□□ 0.47
CLTAP09496 AP000842.3-202ENST00000569238 1080 ntBASIC17.96■□□□□ 0.47
CLTAP09496 AC073389.1-201ENST00000595595 795 ntBASIC17.96■□□□□ 0.47
CLTAP09496 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLTAP09496 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 UXT-AS1-201ENST00000590504 1525 ntBASIC17.96■□□□□ 0.47
CLTAP09496 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
CLTAP09496 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 PCDHA1-201ENST00000378133 2726 ntBASIC17.96■□□□□ 0.47
CLTAP09496 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.96■□□□□ 0.47
CLTAP09496 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLTAP09496 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.96■□□□□ 0.46
CLTAP09496 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLTAP09496 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.95■□□□□ 0.46
CLTAP09496 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.95■□□□□ 0.46
CLTAP09496 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLTAP09496 FAM58DP-201ENST00000428076 619 ntBASIC17.95■□□□□ 0.46
CLTAP09496 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 PRYP6-201ENST00000514804 343 ntBASIC17.95■□□□□ 0.46
CLTAP09496 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.95■□□□□ 0.46
CLTAP09496 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
CLTAP09496 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.95■□□□□ 0.46
CLTAP09496 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.95■□□□□ 0.46
CLTAP09496 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
CLTAP09496 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.95■□□□□ 0.46
CLTAP09496 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.95■□□□□ 0.46
CLTAP09496 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.95■□□□□ 0.46
CLTAP09496 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 LINC02199-201ENST00000506655 2702 ntBASIC17.95■□□□□ 0.46
CLTAP09496 LINC00554-201ENST00000564841 3011 ntBASIC17.95■□□□□ 0.46
CLTAP09496 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
CLTAP09496 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLTAP09496 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms