Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.11■□□□□ 0.01
THBS1P07996 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.11■□□□□ 0.01
THBS1P07996 AL078644.1-201ENST00000609881 752 ntBASIC15.11■□□□□ 0.01
THBS1P07996 FAM197Y3-203ENST00000618346 717 ntBASIC15.11■□□□□ 0.01
THBS1P07996 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.11■□□□□ 0.01
THBS1P07996 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.11■□□□□ 0.01
THBS1P07996 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.11■□□□□ 0.01
THBS1P07996 AC069224.1-201ENST00000566372 1715 ntBASIC15.11■□□□□ 0.01
THBS1P07996 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THBS1P07996 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.11■□□□□ 0.01
THBS1P07996 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.1■□□□□ 0.01
THBS1P07996 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 LINC02447-202ENST00000501888 2146 ntBASIC15.1■□□□□ 0.01
THBS1P07996 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.1■□□□□ 0.01
THBS1P07996 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
THBS1P07996 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.1■□□□□ 0.01
THBS1P07996 AC064836.3-201ENST00000607928 673 ntBASIC15.1■□□□□ 0.01
THBS1P07996 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
THBS1P07996 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.1■□□□□ 0.01
THBS1P07996 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
THBS1P07996 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
THBS1P07996 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THBS1P07996 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 AC104109.2-201ENST00000602919 1418 ntBASIC15.09■□□□□ 0.01
THBS1P07996 AC025580.3-201ENST00000617932 1424 ntBASIC15.09■□□□□ 0.01
THBS1P07996 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
THBS1P07996 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.09■□□□□ 0.01
THBS1P07996 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THBS1P07996 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms