Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
POLR3DP05423 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.58■□□□□ 0.72
POLR3DP05423 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.58■□□□□ 0.72
POLR3DP05423 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
POLR3DP05423 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 GPAA1P2-202ENST00000606848 1787 ntBASIC19.57■□□□□ 0.72
POLR3DP05423 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR3DP05423 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 HLA-H-201ENST00000383620 1096 ntBASIC19.57■□□□□ 0.72
POLR3DP05423 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.57■□□□□ 0.72
POLR3DP05423 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 AC069120.2-201ENST00000524091 540 ntBASIC19.57■□□□□ 0.72
POLR3DP05423 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.57■□□□□ 0.72
POLR3DP05423 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.57■□□□□ 0.72
POLR3DP05423 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.57■□□□□ 0.72
POLR3DP05423 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR3DP05423 LINC02084-201ENST00000606069 1096 ntBASIC19.57■□□□□ 0.72
POLR3DP05423 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
POLR3DP05423 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR3DP05423 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
POLR3DP05423 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
POLR3DP05423 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
POLR3DP05423 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR3DP05423 BASP1P1-201ENST00000430708 665 ntBASIC19.56■□□□□ 0.72
POLR3DP05423 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR3DP05423 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR3DP05423 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 AC098859.1-201ENST00000502915 1238 ntBASIC19.56■□□□□ 0.72
POLR3DP05423 RNA5SP421-201ENST00000516864 134 ntBASIC19.56■□□□□ 0.72
POLR3DP05423 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 MIR3197-201ENST00000582241 73 ntBASIC19.56■□□□□ 0.72
POLR3DP05423 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
POLR3DP05423 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR3DP05423 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR3DP05423 HLA-J-202ENST00000469281 1241 ntBASIC19.55■□□□□ 0.72
POLR3DP05423 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR3DP05423 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR3DP05423 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.55■□□□□ 0.72
POLR3DP05423 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
POLR3DP05423 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms