Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND3P03897 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MT-ND3P03897 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND3P03897 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND3P03897 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ND3P03897 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 AL590787.1-201ENST00000568856 1315 ntBASIC16.78■□□□□ 0.28
MT-ND3P03897 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.78■□□□□ 0.28
MT-ND3P03897 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.78■□□□□ 0.28
MT-ND3P03897 AC025062.2-201ENST00000605477 670 ntBASIC16.78■□□□□ 0.28
MT-ND3P03897 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 AC008735.5-201ENST00000623544 497 ntBASIC16.78■□□□□ 0.28
MT-ND3P03897 AC107918.4-202ENST00000641623 219 ntBASIC16.78■□□□□ 0.28
MT-ND3P03897 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-ND3P03897 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MT-ND3P03897 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-ND3P03897 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND3P03897 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND3P03897 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-ND3P03897 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND3P03897 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 AL512652.2-201ENST00000625156 1716 ntBASIC16.77■□□□□ 0.28
MT-ND3P03897 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-ND3P03897 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MT-ND3P03897 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ND3P03897 LAGE3P1-201ENST00000425356 484 ntBASIC16.77■□□□□ 0.28
MT-ND3P03897 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ND3P03897 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.77■□□□□ 0.28
MT-ND3P03897 IGHV3-22-201ENST00000520721 359 ntBASIC16.77■□□□□ 0.28
MT-ND3P03897 AC105339.3-201ENST00000560043 636 ntBASIC16.77■□□□□ 0.28
MT-ND3P03897 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND3P03897 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-ND3P03897 AL022326.1-202ENST00000641533 845 ntBASIC16.77■□□□□ 0.28
MT-ND3P03897 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-ND3P03897 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
MT-ND3P03897 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
MT-ND3P03897 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
MT-ND3P03897 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MT-ND3P03897 SNX33P1-201ENST00000592116 1762 ntBASIC16.77■□□□□ 0.27
MT-ND3P03897 TOP3BP1-201ENST00000420768 1380 ntBASIC16.77■□□□□ 0.27
MT-ND3P03897 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND3P03897 AC092384.3-202ENST00000564646 2873 ntBASIC16.76■□□□□ 0.27
MT-ND3P03897 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND3P03897 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND3P03897 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms