Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 RN7SL837P-201ENST00000463010 287 ntBASIC17.69■□□□□ 0.42
CHRNA1P02708 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.69■□□□□ 0.42
CHRNA1P02708 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNA1P02708 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.69■□□□□ 0.42
CHRNA1P02708 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHRNA1P02708 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 AL162274.1-201ENST00000617191 1098 ntBASIC17.69■□□□□ 0.42
CHRNA1P02708 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 UBALD1-205ENST00000590891 2641 ntBASIC17.69■□□□□ 0.42
CHRNA1P02708 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CHRNA1P02708 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNA1P02708 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA1P02708 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA1P02708 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA1P02708 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRNA1P02708 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CHRNA1P02708 AC074044.1-201ENST00000609673 707 ntBASIC17.68■□□□□ 0.42
CHRNA1P02708 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNA1P02708 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA1P02708 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA1P02708 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA1P02708 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA1P02708 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA1P02708 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA1P02708 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA1P02708 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHRNA1P02708 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.67■□□□□ 0.42
CHRNA1P02708 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA1P02708 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA1P02708 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms