Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.78□□□□□ -0.04
SPTA1P02549 MIR6069-201ENST00000620069 79 ntBASIC14.78□□□□□ -0.04
SPTA1P02549 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SPTA1P02549 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.78□□□□□ -0.04
SPTA1P02549 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.78□□□□□ -0.04
SPTA1P02549 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
SPTA1P02549 TIMM17BP1-201ENST00000545713 516 ntBASIC14.78□□□□□ -0.04
SPTA1P02549 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SPTA1P02549 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPTA1P02549 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
SPTA1P02549 AC036164.1-201ENST00000570544 333 ntBASIC14.78□□□□□ -0.04
SPTA1P02549 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPTA1P02549 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPTA1P02549 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.78□□□□□ -0.04
SPTA1P02549 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SPTA1P02549 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.77□□□□□ -0.04
SPTA1P02549 FAM86HP-204ENST00000513466 959 ntBASIC14.77□□□□□ -0.04
SPTA1P02549 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.77□□□□□ -0.04
SPTA1P02549 MPDU1-223ENST00000582151 728 ntBASIC14.77□□□□□ -0.04
SPTA1P02549 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.77□□□□□ -0.04
SPTA1P02549 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.77□□□□□ -0.04
SPTA1P02549 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SPTA1P02549 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SPTA1P02549 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 AC138932.1-201ENST00000534164 6830 ntBASIC14.77□□□□□ -0.04
SPTA1P02549 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPTA1P02549 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SPTA1P02549 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 TMEM198B-204ENST00000484016 896 ntBASIC14.77□□□□□ -0.05
SPTA1P02549 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.77□□□□□ -0.05
SPTA1P02549 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.77□□□□□ -0.05
SPTA1P02549 AC009542.2-202ENST00000619004 1067 ntBASIC14.77□□□□□ -0.05
SPTA1P02549 CU634019.7-201ENST00000624153 1185 ntBASIC14.77□□□□□ -0.05
SPTA1P02549 FP236241.2-201ENST00000624906 1185 ntBASIC14.77□□□□□ -0.05
SPTA1P02549 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.77□□□□□ -0.05
SPTA1P02549 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.77□□□□□ -0.05
SPTA1P02549 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 TNXA-203ENST00000507684 2038 ntBASIC14.77□□□□□ -0.05
SPTA1P02549 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SPTA1P02549 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.77□□□□□ -0.05
SPTA1P02549 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPTA1P02549 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.77□□□□□ -0.05
SPTA1P02549 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SPTA1P02549 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SPTA1P02549 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.76□□□□□ -0.05
SPTA1P02549 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.76□□□□□ -0.05
SPTA1P02549 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPTA1P02549 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.76□□□□□ -0.05
SPTA1P02549 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.76□□□□□ -0.05
SPTA1P02549 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SPTA1P02549 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms