Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
MBD3O95983 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.84■□□□□ 0.61
MBD3O95983 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 AL353732.1-201ENST00000569618 1459 ntBASIC18.84■□□□□ 0.61
MBD3O95983 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
MBD3O95983 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.83■□□□□ 0.61
MBD3O95983 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3O95983 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 IGHV3-47-201ENST00000425060 335 ntBASIC18.83■□□□□ 0.6
MBD3O95983 DRAXINP1-201ENST00000437611 948 ntBASIC18.83■□□□□ 0.6
MBD3O95983 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD3O95983 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 LINC01238-205ENST00000567549 1107 ntBASIC18.83■□□□□ 0.6
MBD3O95983 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.83■□□□□ 0.6
MBD3O95983 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 AL139424.1-201ENST00000607572 797 ntBASIC18.83■□□□□ 0.6
MBD3O95983 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 AF228730.7-201ENST00000641842 219 ntBASIC18.83■□□□□ 0.6
MBD3O95983 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.83■□□□□ 0.6
MBD3O95983 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
MBD3O95983 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3O95983 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MBD3O95983 AC005622.1-201ENST00000636801 1703 ntBASIC18.83■□□□□ 0.6
MBD3O95983 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MBD3O95983 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 AC016734.2-201ENST00000624325 1377 ntBASIC18.82■□□□□ 0.6
MBD3O95983 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.82■□□□□ 0.6
MBD3O95983 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MBD3O95983 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 KRT18P1-202ENST00000452408 1331 ntBASIC18.82■□□□□ 0.6
MBD3O95983 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
MBD3O95983 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
MBD3O95983 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.82■□□□□ 0.6
MBD3O95983 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.82■□□□□ 0.6
MBD3O95983 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 AC087641.1-201ENST00000557561 1021 ntBASIC18.82■□□□□ 0.6
MBD3O95983 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.82■□□□□ 0.6
MBD3O95983 AC064862.7-201ENST00000604520 867 ntBASIC18.82■□□□□ 0.6
MBD3O95983 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.82■□□□□ 0.6
MBD3O95983 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MBD3O95983 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MBD3O95983 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD3O95983 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms