Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.77□□□□□ -0.05
UBL3O95164 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.77□□□□□ -0.05
UBL3O95164 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.77□□□□□ -0.05
UBL3O95164 AP001350.2-201ENST00000625104 1094 ntBASIC14.77□□□□□ -0.05
UBL3O95164 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
UBL3O95164 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL3O95164 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UBL3O95164 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBL3O95164 DBET-201ENST00000630918 3363 ntBASIC14.77□□□□□ -0.05
UBL3O95164 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL3O95164 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBL3O95164 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL3O95164 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
UBL3O95164 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.76□□□□□ -0.05
UBL3O95164 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
UBL3O95164 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UBL3O95164 AL022342.1-201ENST00000400363 863 ntBASIC14.76□□□□□ -0.05
UBL3O95164 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.76□□□□□ -0.05
UBL3O95164 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 HCG4B-203ENST00000450128 991 ntBASIC14.76□□□□□ -0.05
UBL3O95164 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.76□□□□□ -0.05
UBL3O95164 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 SLC25A1P1-201ENST00000528351 927 ntBASIC14.76□□□□□ -0.05
UBL3O95164 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 AC027601.4-201ENST00000611259 610 ntBASIC14.76□□□□□ -0.05
UBL3O95164 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.76□□□□□ -0.05
UBL3O95164 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBL3O95164 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.76□□□□□ -0.05
UBL3O95164 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.76□□□□□ -0.05
UBL3O95164 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL3O95164 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UBL3O95164 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
UBL3O95164 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
UBL3O95164 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
UBL3O95164 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
UBL3O95164 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
UBL3O95164 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
UBL3O95164 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.75□□□□□ -0.05
UBL3O95164 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.75□□□□□ -0.05
UBL3O95164 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBL3O95164 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms