Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL13O43927 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL13O43927 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CXCL13O43927 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL13O43927 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL13O43927 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL13O43927 AP3S2-216ENST00000617003 1561 ntBASIC14.68□□□□□ -0.06
CXCL13O43927 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CXCL13O43927 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CXCL13O43927 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL13O43927 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CXCL13O43927 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL13O43927 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CXCL13O43927 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL13O43927 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL13O43927 SPDYE14P-201ENST00000442619 822 ntBASIC14.67□□□□□ -0.06
CXCL13O43927 POU5F1P6-201ENST00000466990 990 ntBASIC14.67□□□□□ -0.06
CXCL13O43927 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 AP001059.3-201ENST00000619053 235 ntBASIC14.67□□□□□ -0.06
CXCL13O43927 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL13O43927 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL13O43927 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL13O43927 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.67□□□□□ -0.06
CXCL13O43927 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL13O43927 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL13O43927 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 ME2P1-201ENST00000426028 1970 ntBASIC14.66□□□□□ -0.06
CXCL13O43927 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.66□□□□□ -0.06
CXCL13O43927 HLA-H-201ENST00000383620 1096 ntBASIC14.66□□□□□ -0.06
CXCL13O43927 RNA5SP410-201ENST00000516285 106 ntBASIC14.66□□□□□ -0.06
CXCL13O43927 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 RARRES2P9-201ENST00000565168 469 ntBASIC14.66□□□□□ -0.06
CXCL13O43927 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.66□□□□□ -0.06
CXCL13O43927 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.66□□□□□ -0.06
CXCL13O43927 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 AL589702.1-201ENST00000641229 1509 ntBASIC14.66□□□□□ -0.06
CXCL13O43927 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.66□□□□□ -0.06
CXCL13O43927 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCL13O43927 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL13O43927 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CXCL13O43927 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms