Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 IGHV3-42-201ENST00000520410 361 ntBASIC16.5■□□□□ 0.23
SMAD6O43541 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD6O43541 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SMAD6O43541 AL133215.2-201ENST00000609242 977 ntBASIC16.5■□□□□ 0.23
SMAD6O43541 AL138828.2-201ENST00000615812 383 ntBASIC16.5■□□□□ 0.23
SMAD6O43541 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SMAD6O43541 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SMAD6O43541 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMAD6O43541 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD6O43541 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SMAD6O43541 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
SMAD6O43541 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.5■□□□□ 0.23
SMAD6O43541 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMAD6O43541 PCDH8P1-201ENST00000428983 2773 ntBASIC16.49■□□□□ 0.23
SMAD6O43541 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD6O43541 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD6O43541 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 BCRP1-201ENST00000444246 691 ntBASIC16.49■□□□□ 0.23
SMAD6O43541 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.49■□□□□ 0.23
SMAD6O43541 AC027369.6-201ENST00000525520 931 ntBASIC16.49■□□□□ 0.23
SMAD6O43541 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.49■□□□□ 0.23
SMAD6O43541 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD6O43541 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.49■□□□□ 0.23
SMAD6O43541 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD6O43541 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMAD6O43541 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.49■□□□□ 0.23
SMAD6O43541 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 AL035456.1-201ENST00000456064 1369 ntBASIC16.49■□□□□ 0.23
SMAD6O43541 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMAD6O43541 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SMAD6O43541 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.49■□□□□ 0.23
SMAD6O43541 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.48■□□□□ 0.23
SMAD6O43541 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.48■□□□□ 0.23
SMAD6O43541 MIR4321-201ENST00000592276 80 ntBASIC16.48■□□□□ 0.23
SMAD6O43541 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.48■□□□□ 0.23
SMAD6O43541 AC073592.8-201ENST00000624126 511 ntBASIC16.48■□□□□ 0.23
SMAD6O43541 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SMAD6O43541 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.48■□□□□ 0.23
SMAD6O43541 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SMAD6O43541 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms