Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TNRC18P3-201ENST00000441896 2691 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
FOXN1O15353 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN1O15353 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN1O15353 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.51■□□□□ 0.71
FOXN1O15353 GPAA1P2-201ENST00000417923 928 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN1O15353 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 MYCLP2-201ENST00000449268 967 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 MPRIPP1-201ENST00000452433 1089 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
FOXN1O15353 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.51■□□□□ 0.71
FOXN1O15353 AC079328.1-201ENST00000560358 952 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 AL138918.1-201ENST00000568306 659 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 BTBD7P1-201ENST00000447253 1453 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
FOXN1O15353 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
FOXN1O15353 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
FOXN1O15353 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 AC093525.8-201ENST00000624099 1342 ntBASIC19.51■□□□□ 0.71
FOXN1O15353 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.5■□□□□ 0.71
FOXN1O15353 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN1O15353 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
FOXN1O15353 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 AC005229.1-201ENST00000392885 409 ntBASIC19.5■□□□□ 0.71
FOXN1O15353 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 ELK1P1-201ENST00000485699 580 ntBASIC19.5■□□□□ 0.71
FOXN1O15353 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN1O15353 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN1O15353 AC243960.2-201ENST00000600996 747 ntBASIC19.5■□□□□ 0.71
FOXN1O15353 U62317.3-201ENST00000608319 855 ntBASIC19.5■□□□□ 0.71
FOXN1O15353 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN1O15353 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
FOXN1O15353 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 CETN4P-206ENST00000642099 2168 ntBASIC19.5■□□□□ 0.71
FOXN1O15353 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXN1O15353 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN1O15353 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
FOXN1O15353 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FOXN1O15353 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
FOXN1O15353 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
FOXN1O15353 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
FOXN1O15353 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
FOXN1O15353 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.49■□□□□ 0.71
FOXN1O15353 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.49■□□□□ 0.71
FOXN1O15353 ZNF767P-206ENST00000513792 565 ntBASIC19.49■□□□□ 0.71
FOXN1O15353 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.49■□□□□ 0.71
FOXN1O15353 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.49■□□□□ 0.71
FOXN1O15353 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms