Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TLR4O00206 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TLR4O00206 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 AC087499.5-201ENST00000452760 1342 ntBASIC16.22■□□□□ 0.19
TLR4O00206 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 PCDHB17P-201ENST00000539533 2393 ntBASIC16.22■□□□□ 0.19
TLR4O00206 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TLR4O00206 RPL37AP1-201ENST00000412502 279 ntBASIC16.22■□□□□ 0.19
TLR4O00206 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 AC009477.1-201ENST00000452936 217 ntBASIC16.22■□□□□ 0.19
TLR4O00206 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR4O00206 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR4O00206 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR4O00206 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 AC105021.1-202ENST00000570572 669 ntBASIC16.22■□□□□ 0.19
TLR4O00206 SPDYE22P-201ENST00000582158 798 ntBASIC16.22■□□□□ 0.19
TLR4O00206 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.22■□□□□ 0.19
TLR4O00206 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 TEX28P1-201ENST00000613479 1221 ntBASIC16.22■□□□□ 0.19
TLR4O00206 TEX28P2-201ENST00000617764 1221 ntBASIC16.22■□□□□ 0.19
TLR4O00206 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
TLR4O00206 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
TLR4O00206 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.22■□□□□ 0.19
TLR4O00206 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TLR4O00206 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR4O00206 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TLR4O00206 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR4O00206 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR4O00206 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 SPTLC1P1-201ENST00000447199 261 ntBASIC16.21■□□□□ 0.19
TLR4O00206 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TLR4O00206 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR4O00206 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 AC025048.6-201ENST00000634326 1161 ntBASIC16.21■□□□□ 0.19
TLR4O00206 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
TLR4O00206 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TLR4O00206 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TLR4O00206 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TLR4O00206 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TLR4O00206 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.21■□□□□ 0.18
TLR4O00206 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TLR4O00206 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
TLR4O00206 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
TLR4O00206 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms