Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.65□□□□□ -0.23
AP4M1O00189 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 AC007326.2-201ENST00000624224 7579 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.64□□□□□ -0.23
AP4M1O00189 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 LINC00982-205ENST00000420957 435 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.64□□□□□ -0.23
AP4M1O00189 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.64□□□□□ -0.23
AP4M1O00189 AC136632.2-201ENST00000512891 861 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 RNA5SP419-201ENST00000515908 135 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.64□□□□□ -0.23
AP4M1O00189 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AP4M1O00189 MIR7706-201ENST00000613747 67 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 AC004706.3-202ENST00000621574 984 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 AC005593.1-201ENST00000624894 515 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.64□□□□□ -0.23
AP4M1O00189 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP4M1O00189 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.64□□□□□ -0.23
AP4M1O00189 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
AP4M1O00189 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
AP4M1O00189 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP4M1O00189 AC016396.2-201ENST00000562575 1417 ntBASIC13.64□□□□□ -0.23
AP4M1O00189 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP4M1O00189 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.63□□□□□ -0.23
AP4M1O00189 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 AL590627.1-203ENST00000421194 1026 ntBASIC13.63□□□□□ -0.23
AP4M1O00189 AC092910.1-201ENST00000482027 1129 ntBASIC13.63□□□□□ -0.23
AP4M1O00189 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.63□□□□□ -0.23
AP4M1O00189 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.63□□□□□ -0.23
AP4M1O00189 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.63□□□□□ -0.23
AP4M1O00189 BX640515.1-201ENST00000617215 977 ntBASIC13.63□□□□□ -0.23
AP4M1O00189 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP4M1O00189 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.63□□□□□ -0.23
AP4M1O00189 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP4M1O00189 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AP4M1O00189 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP4M1O00189 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms