Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 POLD2P1-201ENST00000511220 997 ntBASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL596087.1-201ENST00000400979 1969 ntBASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC016027.1-202ENST00000607927 1699 ntBASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MTHFR-217ENST00000641820 1569 ntBASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MIR574-201ENST00000385209 96 ntBASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AL513523.2-202ENST00000427283 2040 ntBASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 AP002472.1-201ENST00000577490 586 ntBASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM6-TRIM34B2RNG4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM6-TRIM34B2RNG4 KRT18P34-201ENST00000488218 1270 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms