Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
RCCD1A6NED2 AC136632.2-201ENST00000512891 861 ntBASIC17.44■□□□□ 0.38
RCCD1A6NED2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 AC091304.2-201ENST00000564639 760 ntBASIC17.44■□□□□ 0.38
RCCD1A6NED2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC023157.3-201ENST00000619086 2088 ntBASIC17.43■□□□□ 0.38
RCCD1A6NED2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC012640.2-201ENST00000561606 901 ntBASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AC006486.2-201ENST00000624246 2199 ntBASIC17.43■□□□□ 0.38
RCCD1A6NED2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RCCD1A6NED2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCCD1A6NED2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 RNU1-129P-201ENST00000384064 167 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 HMGA1P7-201ENST00000406908 502 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 U1.21-201ENST00000580816 167 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms