Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 SPDYE19P-201ENST00000338590 713 ntBASIC14.29□□□□□ -0.12
MBD3L3A6NE82 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 GNAQP1-201ENST00000444815 1067 ntBASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 SRD5A3P1-201ENST00000603021 949 ntBASIC14.29□□□□□ -0.12
MBD3L3A6NE82 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AC004461.2-201ENST00000629517 803 ntBASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AL109936.8-201ENST00000641772 604 ntBASIC14.29□□□□□ -0.12
MBD3L3A6NE82 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L3A6NE82 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC004987.2-201ENST00000395959 1148 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 COX5BP8-201ENST00000416911 349 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 NME2P1-201ENST00000426182 414 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 HIST3H2BA-201ENST00000436555 524 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 SPDYE18-201ENST00000510091 1050 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC243562.2-201ENST00000561247 970 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC074044.1-201ENST00000609673 707 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC004790.1-201ENST00000612686 536 ntBASIC14.28□□□□□ -0.12
MBD3L3A6NE82 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L3A6NE82 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.27□□□□□ -0.12
MBD3L3A6NE82 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms