Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRIT2A6NDA9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AL592309.1-201ENST00000443127 649 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AC098859.1-201ENST00000502915 1238 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 IGHV3-62-201ENST00000520057 340 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SPTSSB-204ENST00000617024 1292 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AL513210.1-201ENST00000629608 234 ntBASIC15.58■□□□□ 0.08
LRIT2A6NDA9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRIT2A6NDA9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AL391005.1-201ENST00000623953 2435 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 KRT18P13-201ENST00000400056 1290 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC211486.1-202ENST00000416371 468 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC142381.1-201ENST00000426099 345 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC211476.1-201ENST00000503899 468 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AP000842.3-202ENST00000569238 1080 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC084121.4-201ENST00000641598 221 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AF228730.8-201ENST00000642140 221 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AC046158.3-201ENST00000624947 2558 ntBASIC15.57■□□□□ 0.08
LRIT2A6NDA9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LRIT2A6NDA9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
LRIT2A6NDA9 AL513523.2-202ENST00000427283 2040 ntBASIC15.56■□□□□ 0.08
LRIT2A6NDA9 AC026691.1-201ENST00000602502 2017 ntBASIC15.56■□□□□ 0.08
LRIT2A6NDA9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT2A6NDA9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRIT2A6NDA9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.56■□□□□ 0.08
LRIT2A6NDA9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms