Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 SPDYE14P-201ENST00000442619 822 ntBASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 CDC14C-201ENST00000428251 1719 ntBASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV5-4A0A0C4DH59 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 PCDHA1-201ENST00000378133 2726 ntBASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL691403.2-201ENST00000618460 490 ntBASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-4A0A0C4DH59 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 RBPMS2P1-201ENST00000437762 623 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 LINC02447-202ENST00000501888 2146 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL512356.2-201ENST00000546955 174 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 SNHG9-202ENST00000564014 471 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL596442.2-201ENST00000610240 980 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AP001059.3-201ENST00000619053 235 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC139530.3-201ENST00000620344 690 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC079781.4-201ENST00000641908 219 ntBASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-4A0A0C4DH59 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms