Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA3Q9Y5H0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 INGX-202ENST00000489074 768 ntBASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 AC093214.1-201ENST00000511688 1107 ntBASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 AC091167.2-201ENST00000579581 588 ntBASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA3Q9Y5H0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA3Q9Y5H0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 SPDYE7P-202ENST00000420373 878 ntBASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC107890.1-201ENST00000422478 521 ntBASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA3Q9Y5H0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms