Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 AC090950.1-202ENST00000605733 644 ntBASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 AC099522.2-201ENST00000607001 744 ntBASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 TNRC18P3-201ENST00000441896 2691 ntBASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB13Q9Y5F0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 YBX2P1-201ENST00000394192 760 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 MKNK2P1-201ENST00000437526 628 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 ACTG1P14-201ENST00000446382 1122 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 DNAJB3-201ENST00000446806 729 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 RARRES2P8-201ENST00000566335 367 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AC092902.6-201ENST00000641783 218 ntBASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB13Q9Y5F0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 MTND2P9-201ENST00000422293 931 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 PSMC1P2-201ENST00000423961 1204 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AL671277.1-201ENST00000429656 993 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 RSL24D1P2-201ENST00000445584 366 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 MTND2P25-201ENST00000449028 610 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 NPM1P28-201ENST00000492269 840 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 FAM86C2P-203ENST00000528684 1004 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AC021321.1-201ENST00000607397 1113 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms