Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AC148477.5-201ENST00000625164 1645 ntBASIC15.57■□□□□ 0.08
AP4S1Q9Y587 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 SNX18-202ENST00000343017 3140 ntBASIC15.57■□□□□ 0.08
AP4S1Q9Y587 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.57■□□□□ 0.08
AP4S1Q9Y587 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AL592071.1-201ENST00000611956 408 ntBASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 SBF1P1-201ENST00000444527 5631 ntBASIC15.57■□□□□ 0.08
AP4S1Q9Y587 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4S1Q9Y587 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 AL020989.1-201ENST00000422979 469 ntBASIC15.56■□□□□ 0.08
AP4S1Q9Y587 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 AC011467.2-201ENST00000598425 242 ntBASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 AC010654.1-201ENST00000615722 808 ntBASIC15.56■□□□□ 0.08
AP4S1Q9Y587 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms