Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC079781.5-202ENST00000641784 3743 ntBASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AC007326.2-201ENST00000624224 7579 ntBASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 RNF152P1-201ENST00000397754 604 ntBASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AC117947.1-201ENST00000427448 529 ntBASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AL139011.1-202ENST00000642063 584 ntBASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 AL671710.1-201ENST00000610245 2349 ntBASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH1Q9Y2L9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 AC013726.1-201ENST00000563747 2285 ntBASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 YBX1P2-201ENST00000489612 999 ntBASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 IGHV3-52-201ENST00000519770 353 ntBASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 AL359183.1-201ENST00000623796 2132 ntBASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms