Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 MIR770-201ENST00000390219 98 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 ACTG1P14-201ENST00000446382 1122 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 TIMM8BP1-201ENST00000452384 211 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 AL161645.1-201ENST00000622716 1255 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 AL139011.1-202ENST00000642063 584 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 SNX33P1-201ENST00000592116 1762 ntBASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.11■□□□□ 0.01
RPH3AQ9Y2J0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 KRT8P39-201ENST00000396270 1433 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 PMS2P4-201ENST00000412466 1052 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AL355306.1-201ENST00000415580 579 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AC092474.2-201ENST00000424288 719 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AC011467.4-201ENST00000594891 528 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 AC092171.3-201ENST00000610122 2651 ntBASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RPH3AQ9Y2J0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms