Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AL356000.1-201ENST00000441073 1238 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC107373.2-201ENST00000607735 490 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC093484.2-201ENST00000580996 2166 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AL354751.1-201ENST00000412768 1863 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC004987.2-201ENST00000395959 1148 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RCC2P8-201ENST00000502779 1035 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC012073.1-201ENST00000606114 1108 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC026979.3-201ENST00000607315 403 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 NAP1L6-202ENST00000641404 1222 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PGGT1BP2-201ENST00000398621 1028 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
MACF1Q9UPN3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 MIR566-201ENST00000385187 94 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CTBP2P8-201ENST00000422584 1330 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC022137.2-201ENST00000503482 481 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 PDIA3P2-201ENST00000428073 158 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms