Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC063926.2-201ENST00000623766 1308 ntBASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC007541.1-201ENST00000570282 1469 ntBASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.71■□□□□ 0.58
SYNPO2Q9UMS6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.71■□□□□ 0.58
SYNPO2Q9UMS6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SYNPO2Q9UMS6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AC239800.4-201ENST00000603712 296 ntBASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AL109936.8-201ENST00000641772 604 ntBASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 AC011270.2-201ENST00000624293 2550 ntBASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SYNPO2Q9UMS6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 FLJ38576-201ENST00000623820 2459 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 AP005018.1-201ENST00000525475 301 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 AC055876.2-201ENST00000531834 546 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 AL596325.1-201ENST00000563991 1082 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 AC004790.1-201ENST00000612686 536 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPO2Q9UMS6 SLC7A15P-201ENST00000424028 1363 ntBASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SYNPO2Q9UMS6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms