Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 USP40-206ENST00000443711 628 ntTSL 2 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 AC005740.2-201ENST00000511085 419 ntBASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 RTN3P1-201ENST00000536295 711 ntBASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 AC138466.4-201ENST00000623965 852 ntBASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 PRSS30P-206ENST00000641773 873 ntBASIC25.33■■□□□ 1.65
RIMBP3Q9UFD9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RIMBP3Q9UFD9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.33■■□□□ 1.64
RIMBP3Q9UFD9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 DPM3-202ENST00000368399 517 ntBASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 AC242376.1-201ENST00000559033 726 ntBASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 DNM1P30-201ENST00000563586 452 ntBASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 AC007787.1-201ENST00000588095 1583 ntBASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RIMBP3Q9UFD9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 FTLP5-201ENST00000586853 534 ntBASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 AC138894.2-201ENST00000602838 371 ntBASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 AC242376.2-201ENST00000619355 883 ntBASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 AC051619.9-201ENST00000623237 597 ntBASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 AL805961.1-203ENST00000641078 1258 ntBASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RIMBP3Q9UFD9 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AC012158.2-201ENST00000536546 354 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 ACTBP8-201ENST00000403258 1108 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 ACTBP7-201ENST00000418351 1124 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 POU5F1P6-201ENST00000466990 990 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AC027139.1-201ENST00000565286 951 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms