Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AC105021.1-202ENST00000570572 669 ntBASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AC061975.2-201ENST00000581722 295 ntBASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AC024267.1-201ENST00000582320 895 ntBASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AL138828.2-201ENST00000615812 383 ntBASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 AC027369.6-201ENST00000525520 931 ntBASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 MIR4745-201ENST00000577608 62 ntBASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 AC100757.3-201ENST00000622361 1406 ntBASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCF1Q9UBD9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.54□□□□□ -0.08
CLCF1Q9UBD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms