Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC073347.1-201ENST00000421633 2643 ntBASIC20.23■□□□□ 0.83
UPF2Q9HAU5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 LINC00265-3P-201ENST00000447588 903 ntBASIC20.23■□□□□ 0.83
UPF2Q9HAU5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 AC131009.4-201ENST00000624048 1740 ntBASIC20.23■□□□□ 0.83
UPF2Q9HAU5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 AC112504.1-201ENST00000623415 1841 ntBASIC20.23■□□□□ 0.83
UPF2Q9HAU5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPF2Q9HAU5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 AL356309.3-201ENST00000624132 1934 ntBASIC20.22■□□□□ 0.83
UPF2Q9HAU5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 IGHV3-47-201ENST00000425060 335 ntBASIC20.22■□□□□ 0.83
UPF2Q9HAU5 PRYP5-201ENST00000451909 266 ntBASIC20.22■□□□□ 0.83
UPF2Q9HAU5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 LINC01023-201ENST00000606054 436 ntBASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 AC097376.2-205ENST00000610159 5334 ntBASIC20.22■□□□□ 0.83
UPF2Q9HAU5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
UPF2Q9HAU5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AP002414.2-201ENST00000591780 3365 ntBASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AC074051.2-201ENST00000565115 352 ntBASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
UPF2Q9HAU5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms