Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ZNF259P1-201ENST00000407656 1365 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AL590627.1-203ENST00000421194 1026 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC007967.2-201ENST00000432613 625 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 KRT19P2-202ENST00000557173 1012 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AL121894.2-201ENST00000602977 491 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 AL592424.1-201ENST00000563624 1536 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 U82695.1-201ENST00000635752 1889 ntBASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC40Q9H9A6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AC092474.2-201ENST00000424288 719 ntBASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 KRT18P34-201ENST00000488218 1270 ntBASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 BX640515.1-201ENST00000617215 977 ntBASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC40Q9H9A6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AC024909.3-201ENST00000611513 2257 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms